Query

Please select a Somatic Motif Detection

Transcription Factor Somatic Motif:
includes three datasets (ICGC, GTEx and dbSNP)

RNA Binding Protein Somatic Motif:
includes five datasets (ICGC, TCGA, GTEx, REDIportal and dbSNP)

miRNA Seed Somatic Motif:
includes five datasets (ICGC, TCGA, GTEx, REDIportal and dbSNP)

miRNA-mRNA 3'UTR Somatic Motif:
includes five datasets (ICGC, TCGA, GTEx, REDIportal and dbSNP)

To Identify Novel Somatic Motifs

To identify novel somatic motifs based on your own sequencing results, please use our SomaticMotif tool.

Other useful resources

RNA Binding Protein Motif download from ATtRACT , oRNAment , RBPDB , RBPmap databases.

Transcription Factor Motifs download from JASPAR database.

Projects for ICGC dataset: here .

Projects for TCGA Mutation dataset: here .

Tissues for GTEx SNPs dataset: here .

miRNA seed data from miRBase database.

miRNA-mRNA 3'UTR data from starBase v2.0 database.

Our citation for genes from GeneCards.