Predefined mutation files of ICGC project (GRCH37)
Project Code ( Project Name, US:Primary Site:Country )
ALL-US ( Acute Lymphoblastic Leukemia - TARGET, US:Blood:United States ) ALL-US_all.csv.gz
AML-US ( Acute Myeloid Leukemia - TARGET, US:Blood:United States ) AML-US_all.csv.gz
BLCA-CN ( Bladder Cancer - CN:Bladder:China ) BLCA-CN_all.csv.gz
BLCA-US ( Bladder Urothelial Cancer - TCGA, US:Bladder:United States ) BLCA-US_all.csv.gz
BOCA-FR ( Soft Tissue cancer - Ewing sarcoma - FR:Bone:France ) BOCA-FR_all.csv.gz
BOCA-UK ( Bone Cancer - UK:Bone:United Kingdom ) BOCA-UK_all.csv.gz
BPLL-FR ( B-Cell Prolymphocytic Leukemia:Blood:France ) BPLL-FR_all.csv.gz
BRCA-EU ( Breast ER+ and HER2- Cancer - EU/UK:Breast:European Union, United Kingdom ) BRCA-EU_all.csv.gz
BRCA-FR ( Breast Cancer - FR:Breast:France ) BRCA-FR_all.csv.gz
BRCA-KR ( Breast Cancer - Very young women:Breast:South Korea ) BRCA-KR_all.csv.gz
BRCA-UK ( Breast Triple Negative/Lobular Cancer - UK:Breast:United Kingdom ) BRCA-UK_all.csv.gz
BRCA-US ( Breast Cancer - TCGA, US:Breast:United States ) BRCA-US_all.csv.gz
BTCA-JP ( Biliary Tract Cancer - JP:Gall Bladder:Japan ) BTCA-JP_all.csv.gz
BTCA-SG ( Biliary Tract Cancer - SG:Gall Bladder:Singapore ) BTCA-SG_all.csv.gz
CESC-US ( Cervical Squamous Cell Carcinoma - TCGA, US:Cervix:United States ) CESC-US_all.csv.gz
CLLE-ES ( Chronic Lymphocytic Leukemia - ES:Blood:Spain ) CLLE-ES_all.csv.gz
CMDI-UK ( Chronic Myeloid Disorders - UK:Blood:United Kingdom ) CMDI-UK_all.csv.gz
COAD-US ( Colon Adenocarcinoma - TCGA, US:Colorectal:United States ) COAD-US_all.csv.gz
COCA-CN ( Colorectal Cancer - CN:Colorectal:China ) COCA-CN_all.csv.gz
DLBC-US ( Lymphoid Neoplasm Diffuse Large B-cell Lymphoma - TCGA, US:Blood:United States ) DLBC-US_all.csv.gz
EOPC-DE ( Early Onset Prostate Cancer - DE:Prostate:Germany ) EOPC-DE_all.csv.gz
ESAD-UK ( Esophageal Adenocarcinoma - UK:Esophagus:United Kingdom ) ESAD-UK_all.csv.gz
ESCA-CN ( Esophageal Cancer - CN:Esophagus:China ) ESCA-CN_all.csv.gz
GACA-CN ( Gastric Cancer - CN:Stomach:China ) GACA-CN_all.csv.gz
GACA-JP ( Gastric Cancer - JP:Stomach:Japan ) GACA-JP_all.csv.gz
GBM-US ( Brain Glioblastoma Multiforme - TCGA, US:Brain:United States ) GBM-US_all.csv.gz
HNSC-US ( Head and Neck Squamous Cell Carcinoma - TCGA, US:Head and neck:United States ) HNSC-US_all.csv.gz
KICH-US ( Kidney Chromophobe - TCGA, US:Kidney:United States ) KICH-US_all.csv.gz
KIRC-US ( Kidney Renal Clear Cell Carcinoma - TCGA, US:Kidney:United States ) KIRC-US_all.csv.gz
KIRP-US ( Kidney Renal Papillary Cell Carcinoma - TCGA, US:Kidney:United States ) KIRP-US_all.csv.gz
LAML-CN ( Leukemia - CN:Blood:China ) LAML-CN_all.csv.gz
LAML-KR ( Acute Myeloid Leukemia - KR:Blood:South Korea ) LAML-KR_all.csv.gz
LAML-US ( Acute Myeloid Leukemia - TCGA, US:Blood:United States ) LAML-US_all.csv.gz
LGG-US ( Brain Lower Grade Glioma - TCGA, US:Brain:United States ) LGG-US_all.csv.gz
LIAD-FR ( Benign Liver Tumour - FR:Liver:France ) LIAD-FR_all.csv.gz
LICA-CN ( Liver Cancer - CN:Liver:China ) LICA-CN_all.csv.gz
LICA-FR ( Liver Cancer - FR:Liver:France ) LICA-FR_all.csv.gz
LIHC-US ( Liver Hepatocellular carcinoma - TCGA, US:Liver:United States ) LIHC-US_all.csv.gz
LIHM-FR ( Liver Cancer - Hepatocellular macronodules:Liver:France ) LIHM-FR_all.csv.gz
LINC-JP ( Liver Cancer - NCC, JP:Liver:Japan ) LINC-JP_all.csv.gz
LIRI-JP ( Liver Cancer - RIKEN, JP:Liver:Japan ) LIRI-JP_all.csv.gz
LMS-FR ( Soft tissue cancer - Leiomyosarcoma:Mesenchymal:France ) LMS-FR_all.csv.gz
LUAD-US ( Lung Adenocarcinoma - TCGA, US:Lung:United States ) LUAD-US_all.csv.gz
LUSC-CN ( Lung Cancer - CN:Lung:China ) LUSC-CN_all.csv.gz
LUSC-KR ( Lung Cancer - KR:Lung:South Korea ) LUSC-KR_all.csv.gz
LUSC-US ( Lung Squamous Cell Carcinoma - TCGA, US:Lung:United States ) LUSC-US_all.csv.gz
MALY-DE ( Malignant Lymphoma - DE:Blood:Germany ) MALY-DE_all.csv.gz
MELA-AU ( Skin Cancer - AU:Skin:Australia ) MELA-AU_all.csv.gz
NACA-CN ( Nasopharyngeal cancer - CN:Nasopharynx:China ) NACA-CN_all.csv.gz
NBL-US ( Neuroblastoma - TARGET, US:Nervous System:United States ) NBL-US_all.csv.gz
NKTL-SG ( Blood Cancer - T-cell and NK-cell lymphoma - SG:Blood:Singapore ) NKTL-SG_all.csv.gz
ORCA-IN ( Oral Cancer - IN:Head and neck:India ) ORCA-IN_all.csv.gz
OV-AU ( Ovarian Cancer - AU:Ovary:Australia ) OV-AU_all.csv.gz
OV-US ( Ovarian Serous Cystadenocarcinoma - TCGA, US:Ovary:United States ) OV-US_all.csv.gz
PAAD-US ( Pancreatic Cancer - TCGA, US:Pancreas:United States ) PAAD-US_all.csv.gz
PACA-AU ( Pancreatic Cancer - AU:Pancreas:Australia ) PACA-AU_all.csv.gz
PACA-CA ( Pancreatic Cancer - CA:Pancreas:Canada ) PACA-CA_all.csv.gz
PAEN-AU ( Pancreatic Cancer Endocrine neoplasms - AU:Pancreas:Australia ) PAEN-AU_all.csv.gz
PAEN-IT ( Pancreatic Endocrine Neoplasms - IT:Pancreas:Italy ) PAEN-IT_all.csv.gz
PBCA-DE ( Pediatric Brain Cancer - DE:Brain:Germany ) PBCA-DE_all.csv.gz
PBCA-US ( Pediatric Brain Tumor - Multiple subtypes:Brain:United States ) PBCA-US_all.csv.gz
PEME-CA ( Pediatric Medulloblastoma - CA:Brain:Canada ) PEME-CA_all.csv.gz
PRAD-CA ( Prostate Adenocarcinoma - CA:Prostate:Canada ) PRAD-CA_all.csv.gz
PRAD-CN ( Prostate Cancer - CN:Prostate:China ) PRAD-CN_all.csv.gz
PRAD-FR ( Prostate Cancer - Adenocarcinoma:Prostate:France ) PRAD-FR_all.csv.gz
PRAD-UK ( Prostate Adenocarcinoma - UK:Prostate:United Kingdom ) PRAD-UK_all.csv.gz
PRAD-US ( Prostate Adenocarcinoma - TCGA, US:Prostate:United States ) PRAD-US_all.csv.gz
READ-US ( Rectum Adenocarcinoma - TCGA, US:Colorectal:United States ) READ-US_all.csv.gz
RECA-CN ( Renal Cancer - CN:Kidney:China ) RECA-CN_all.csv.gz
RECA-EU ( Renal Cell Cancer - EU/FR:Kidney:European Union, France ) RECA-EU_all.csv.gz
RT-US ( Rhabdoid Tumors - TARGET, US:Kidney:United States ) RT-US_all.csv.gz
SARC-US ( Sarcoma - TCGA, US:Mesenchymal:United States ) SARC-US_all.csv.gz
SKCA-BR ( Skin Adenocarcinoma - BR:Skin:Brazil ) SKCA-BR_all.csv.gz
SKCM-US ( Skin Cutaneous melanoma - TCGA, US:Skin:United States ) SKCM-US_all.csv.gz
STAD-US ( Gastric Adenocarcinoma - TCGA, US:Stomach:United States ) STAD-US_all.csv.gz
THCA-CN ( Thyroid Cancer - CN:Head and neck:China ) THCA-CN_all.csv.gz
THCA-SA ( Thyroid Cancer - SA:Head and neck:Saudi Arabia ) THCA-SA_all.csv.gz
THCA-US ( Head and Neck Thyroid Carcinoma - TCGA, US:Head and neck:United States ) THCA-US_all.csv.gz
UCEC-US ( Uterine Corpus Endometrial Carcinoma- TCGA, US:Uterus:United States ) UCEC-US_all.csv.gz
UTCA-FR ( Uterine Cancer - Carcinosarcoma:Uterus:France ) UTCA-FR_all.csv.gz
WT-US ( Wilms Tumor - TARGET, US:Kidney:United States ) WT-US_all.csv.gz